Rapid inventory using COI + ITS2 + morphologhy

In the last EZ publication of 2016, we investigated how classical DNA barcoding (using the COI locus) compares to rapid DNA barcoding with swift assessment of morphology. We focus on a poorly studied, but diverse spider genus, Pseudopoda, from East Asia. We augmented the standard barcoding locus (COI) with nuclear DNA sequence data (ITS2) and analyzed congruence among datasets and species delimitation methods for a total of 572 individuals representing 23 described species and many potentially new species. Our results suggest that a combination of CO1 + ITS2 fragments identify and diagnose species better than the mitochondrial barcodes alone, and that certain tree based methods yield considerably higher diversity estimates than the distance-based approaches and morphology. Combined, through an extensive field survey, we detect a twofold increase in species diversity in the surveyed area, at 42–45, with most species representing short range endemics.


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National Institute of Biology

Večna pot 111, Ljubljana, Slovenia

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Jovan Hadži Institute of Biology ZRC SAZU

Novi trg 2, Ljubljana, Slovenia (seat)

- Zagorica 20, Ig, Slovenia (loc. 1)

- Moša Pijade 22, Maribor, Slovenia (loc. 2)

eazylab@gmail.com

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